rs138021244 chr17:20533269 G>A
- Sequence
agacgttgggaaaggagaagggtc[G/A]ggaaggagaggggagggaaggaga
- ASB in cell types
- HEK293 (embryonic kidney) hNSC (neural stem cells) HEK293T (embryonic kidney) HDF(human dermal fibroblasts)
- ASB for transcription factors
- ZN366_HUMAN MAZ_HUMAN CHD8_HUMAN PRDM9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN366_HUMAN | 2.42 | -2.24 | 1.00 | n/a | n/a | |||
| MAZ_HUMAN | 3.56 | -3.35 | 1.00 | -1.71 | Weak Concordant | |||
| CHD8_HUMAN | 3.44 | n/a | 1.00 | n/a | n/a | |||
| PRDM9_HUMAN | 2.30 | 0.15 | 2.00 | n/a | No Hit | |||
| REPI1_HUMAN | 3.02 | -3.01 | 1.00 | n/a | n/a |
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Motif analysis
