rs1380442 chr10:126171086 T>G
- Sequence
catatggactctccaagggtaaat[T/G]gacattttccccagtgccttaatt
- ASB in cell types
- iPS-derived chondrocytes
- ASB for transcription factors
- RARA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 1.83 | -0.11 | 1.00 | -5.03 | Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration, height, ldl cholesterol change with statins, triglycerides change with statins