ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs138229
chr22:50118978
A
>
G
Sequence
caaggggctgtagggatgtaaccc[A/G]gaaaaggagcaggaaagtccctcg
ASB in cell types
HAEC (human aortic endothelial cells)
ASB for transcription factors
JUN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN
n/a
2.55
1.00
0.03
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
behavioural disinhibition (generation interaction)
GRASP
eye color
,
maternal transmission distortion
,
schizophrenia
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Brain_Caudate_basal_ganglia
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)