rs1382706 chr5:118198899 T>C

Sequence
tcccaagaccattagtctaaaatg[T/C]tgaggatgtcaatatttacatagc
ASB for transcription factors
FOXA1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 2.54 -0.23 0.021.00 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  homa-ir
GTEx eQTL Adipose_Visceral_Omentum,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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