rs1382712 chr5:118193695 G>A

Sequence
ggcaggacttaaatttcatgatta[G/A]gtttgtatcacagaggtttttttg
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
DUX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 4.38 -4.72 2.3·10-101.00 1.00 -1.41 Weak Concordant
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Motif analysis

DUX4_HUMAN Weak Concordant
DUX4_HUMAN pic

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  homa-ir
GTEx eQTL Adipose_Visceral_Omentum,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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