ADASTRA v6.1.0
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rs138528
chr22:46609515
G
>
A
Sequence
ctcttttcacgggaggagctattt[G/A]aggccatgtgggtttacttctgta
ASB in cell types
breast tumor
MDA-MB-453 (breast adenocarcinoma)
ASB for transcription factors
ESR1_HUMAN
PRGR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
-1.41
3.43
1.00
1.8·10
-5
2.00
n/a
No Hit
PRGR_HUMAN
-2.00
2.94
1.00
6.3·10
-3
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
mitral annular calcium
,
partial epilepsy
,
schizophrenia
,
serum creatinine
GTEx eQTL
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)