rs1387389 chr1:164720525 G>A

Sequence
attatagttctggccacaaaggaa[G/A]caatgcccctagaactctctgatg
ASB for transcription factors
IKZF1_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.39 2.44 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI breast cancer (prognosis)
GRASP breast cancer (nodal status in early age of onset breast cancer diagnosed before age 40),  breast cancer early age of onset (diagnosed before age 40),  fasting insulin,  irritible bowel syndrome,  microalbuminuria,  rheumatoid arthritis
GTEx eQTL Muscle_Skeletal

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