rs1387473 chr2:178909546 G>A
- Sequence
caggaagctactttcaagaagact[G/A]tactgtctgtgattgtctgaatta
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.44 | -0.03 | 1.91 | -3.63 | Concordant | |||
| FOXA1_HUMAN | 2.54 | -0.14 | 2.00 | n/a | No Hit |
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Motif analysis
