rs138785 chr22:35328666 C>A
- Sequence
cacaggatgttgaaaggcacccgc[C/A]ctgtccccgtgctaagggcgatga
- ASB in cell types
- neutrophils from periferal blood THP-1 (acute monocytic leukemia) renal cortex
- ASB for transcription factors
- RAD21_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.73 | 0.15 | 1.42 | n/a | n/a | |||
| CREB1_HUMAN | 2.21 | -1.65 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, bipolar disorder, fasting blood glucose, fasting insulin, hdl cholesterol change with statins, hip bone mineral density (bmd), homa-ir, ldl cholesterol, longstanding arthritis, rheumatoid arthritis, total cholesterol, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Coronary, Artery_Tibial, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Testis, Whole_Blood