rs1388941 chr8:19757960 A>G
- Sequence
gccaggagagaagagggagaggaa[A/G]ggctaaaaaggcaagtggagtgtt
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) K562 (myelogenous leukemia) A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.29 | 0.13 | 1.88 | n/a | n/a | |||
| RAD21_HUMAN | 1.05 | 0.28 | 1.74 | n/a | n/a |
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