rs1388970 chr1:224065681 A>G

Sequence
gaagttgcaacctcagtgaaccac[A/G]aaaccatccccacaggcaggcagt
ASB in cell types
pancreatic ductal adenocarcinoma CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.92 -0.11 8.5·10-31.00 1.96 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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