rs1389652 chr14:50658522 T>C
- Sequence
aggctctaaaactttctgagatta[T/C]acaacttgtttttgtgcttctact
- ASB in cell types
- PC3(bone mets prostate adenocarcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -3.10 | 1.78 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, chronic kidney disease, height, ldl cholesterol, obesity with early age of onset (age >2), refractive error, systolic blood pressure (sbp), total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Heart_Atrial_Appendage, Liver, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg