rs1391154 chr3:98329710 C>T
- Sequence
ctaaagcctgtttactgtccattg[C/T]cttcaggcgccatctgctggatca
- ASB in cell types
- HuCCT1 (intrahepatic cholangiocarcinoma)
- ASB for transcription factors
- SMC1A_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC1A_HUMAN | 1.83 | -0.35 | 2.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.20 | 0.87 | 1.00 | n/a | n/a |
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