rs1391643 chr17:73311151 C>T

Sequence
cgggtggctcgactgccctccccc[C/T]gcaccccgccaggaggcgcctcgg
ASB in cell types
T47D (invasive ductal carcinoma) CD34+ stem cells-derived erythroblasts neutrophils HepG2 (hepatoblastoma)
ASB for transcription factors
SKI_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SKI_HUMAN 2.69 -5.02 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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