rs139383 chr22:39131904 G>A

Sequence
caaccctctatcatctttacctcc[G/A]ctgggcacccctctcctggaagag
ASB in cell types
macrophages
ASB for transcription factors
CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.08 -3.40 3.3·10-31.00 2.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP height,  schizophrenia,  spine bone mineral density (bmd),  tetrology of fallot
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Brain_Cerebellum,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid,  Whole_Blood

Download