rs1396055 chr4:145809535 C>T

Sequence
aggattatgagaagggtctgaatt[C/T]taaaatgaaggtgtagtttctata
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.99 0.52 0.010.69 1.05
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  hdl cholesterol change with statins,  late onset alzheimers disease,  ldl cholesterol,  paternal transmission distortion,  premature ovarian failure,  systolic blood pressure (sbp)
GTEx eQTL Artery_Tibial,  Skin_Sun_Exposed_Lower_leg

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