rs1397103 chr8:77656251 T>C

Sequence
aactctcacatctcagattctaaa[T/C]taataccactcaacagaaaatttc
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.96 -0.60 6.1·10-30.99 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  fasting blood glucose,  hdl cholesterol,  total cholesterol change with statins,  waist hip ratio
GTEx eQTL Brain_Cerebellum

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