rs1397832 chr11:97761370 T>C
- Sequence
aaactactgtatctgatgatgtca[T/C]attaatctgtcattgaaatactta
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 3.26 | -3.23 | 1.00 | -1.42 | Weak Concordant | |||
| ATF7_HUMAN | 2.45 | -2.12 | 1.00 | -1.26 | Weak Concordant |
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Motif analysis
