rs1398345 chr3:110583466 A>T

Sequence
caaaaggtcaacagttagtgttac[A/T]ttgaggctgacaaagaatgttgcc
ASB in cell types
pancreatic ductal adenocarcinoma
ASB for transcription factors
FOXA1_HUMAN MED16_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.52 -0.48 3.1·10-31.00 1.17 n/a No Hit
MED16_HUMAN -0.55 1.42 0.990.03 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

Download