rs1398584 chr13:104064364 C>T
- Sequence
tacagcatctcccttgggcagcat[C/T]tcattttggtttattaatgtggta
- ASB in cell types
- naive endoderm
- ASB for transcription factors
- CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDX2_HUMAN | -2.15 | 2.42 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease (apoe4 positive), asthma, ldl cholesterol change with statins, obesity with early age of onset (age >2), total cholesterol change with statins