rs1398873 chr15:98852876 C>T

Sequence
catccctgcccttattctggcttt[C/T]ttctcttccatctcctggtgagca
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN ZN121_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 3.39 0.79 6.4·10-40.87 1.17 n/a No Hit
ZN121_HUMAN 3.08 -5.59 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder)

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