rs1399941 chr6:92811168 G>T
- Sequence
ccagcccctgtaacagttattttc[G/T]ccccctccagtggcttggaattgg
- ASB in cell types
- GM02630 (Fanconi anemi) GM02255 (Lymphoblastoid Cell Lines)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM02630 (Fanconi anemi) | 1.09 | -0.16 | 1.00 | |||
| GM02255 (Lymphoblastoid Cell Lines) | 1.21 | -0.97 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, spine bone mineral density (bmd), total cholesterol, variant creutzfeldt-jakob disease