rs1400142 chr12:73048715 C>T
- Sequence
ttggaccttggaaatttctcattg[C/T]gaaatgattatttttgcttatgga
- ASB in cell types
- MSC (mesenchymal stem cells)
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 2.32 | -1.39 | 1.00 | -2.50 | Concordant |
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Motif analysis
Genetic associations
GRASP aortic valve calcium, body mass index (bmi), chronic kidney disease, docetaxel response in lymphoblastoid cell lines, obesity with early age of onset (age >2), paclitaxel-induced cytotoxicity in lymphoblastoid cell lines, parkinsons disease, schizophrenia