rs1400703 chr2:155634382 C>T
- Sequence
ttgaccagttctgtttttctcact[C/T]ccttatagatattgccctgaagag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- REQU_HUMAN MEF2B_HUMAN IKZF1_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | n/a | 4.40 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | -4.10 | 3.78 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -3.31 | 3.04 | 1.50 | n/a | n/a | |||
| SMRC1_HUMAN | -2.80 | 3.19 | 1.00 | n/a | n/a | |||
| BACH1_HUMAN | n/a | 3.00 | 1.00 | n/a | No Hit |
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