rs1400987 chr1:206923405 G>T

Sequence
tgatgtcctccagccctgaaatgg[G/T]ccaagatggcagagggcagcctcg
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.59 1.13 0.940.03 1.05 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_EBV-transformed_lymphocytes,  Lung,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Spleen,  Thyroid,  Whole_Blood

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