rs140174679 chr1:5885901 C>T
- Sequence
tgcgcagagtgctgcgggtggatt[C/T]gacctttgtgaaaacctctccctc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- COT1_HUMAN KDM1A_HUMAN MEIS2_HUMAN ID3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 2.16 | 4.00 | 5.20 | Concordant | |||
| KDM1A_HUMAN | 0.39 | 1.17 | 1.00 | n/a | n/a | |||
| MEIS2_HUMAN | -1.73 | 1.73 | 1.00 | n/a | No Hit | |||
| ID3_HUMAN | n/a | 2.31 | 2.00 | n/a | n/a | |||
| REQU_HUMAN | -0.58 | 1.16 | 1.00 | n/a | n/a |
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Motif analysis
