rs1402571 chr6:154650528 G>C
- Sequence
ctcactaagcttaatcatttttag[G/C]ttttgattcaaagtgagaggcatg
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- TF65_HUMAN RING2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.81 | 0.39 | 2.00 | n/a | No Hit | |||
| RING2_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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