rs1402965 chr3:180080495 C>T
- Sequence
taataaaaacttcccaaactgaaa[C/T]gtaaacatcgtttaaaaagaacaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN TLE3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.34 | 2.39 | 2.08 | 4.89 | Concordant | |||
| ANDR_HUMAN | 1.70 | 1.81 | 1.81 | 2.36 | Concordant | |||
| TLE3_HUMAN | n/a | 2.64 | 1.50 | n/a | n/a |
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Motif analysis
