rs1403590 chr15:26052477 C>T

Sequence
gggctgcacttgccaatagcaaca[C/T]ctggcaaaaatagctaagaagcag
ASB in cell types
D341 Med (medulloblastoma)
ASB for transcription factors
NDF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NDF1_HUMAN n/a 2.84 1.005.7·10-3 1.00 2.58 Concordant
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Motif analysis

NDF1_HUMAN Concordant
NDF1_HUMAN pic

Genetic associations

GRASP hdl cholesterol,  serum creatinine

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