rs1406288 chr7:147412838 G>A
- Sequence
aatggactatataaactaaggcat[G/A]tgacacagctgaaataagaagttg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN EPAS1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.40 | -1.43 | 2.00 | 3.86 | Discordant | |||
| EPAS1_HUMAN | -1.98 | 1.97 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP fasting blood glucose, mitral annular calcium, rheumatoid arthritis, tetrology of fallot, triglycerides