rs1406542 chr3:99394858 C>A
- Sequence
agtcagtcactgggtgcagactgc[C/A]ccagggaaagaaatacaactttag
- ASB in cell types
- MCF10A (breast epithelial cells) Detroit 562 (Pharyngeal squamous cell carcinoma)
- ASB for transcription factors
- TF65_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.33 | n/a | 1.00 | n/a | No Hit | |||
| TEAD4_HUMAN | 2.95 | -2.61 | 1.00 | n/a | No Hit |
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