rs1406714 chr15:92918141 C>G
- Sequence
ccctcttgtggccatttgggaaac[C/G]gcgattaaaaatggaacagtaagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN CLOCK_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.21 | -0.25 | 1.17 | n/a | No Hit | |||
| CLOCK_HUMAN | -1.38 | 1.89 | 1.00 | n/a | No Hit |
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