rs1407767 chr20:1291575 A>G

Sequence
attagcattctaggagcaccaggc[A/G]ctctgctgtctgatgggtggaatg
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) LHSAR (prostate epithelial cells)
ASB for transcription factors
TCF21_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN n/a 3.51 1.004.1·10-4 2.00 n/a No Hit
ANDR_HUMAN -0.18 1.81 1.006.9·10-3 1.57 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  cystatin c in serum,  ldl cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Testis,  Whole_Blood

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