rs1407883 chr1:30757279 C>T
- Sequence
caaacaatcccagcccacgttcct[C/T]ccaagatccctgccttccaaagca
- ASB in cell types
- primary B-CLL cells GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -2.06 | 2.33 | 1.00 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Esophagus_Muscularis, Muscle_Skeletal, Thyroid, Whole_Blood