rs1408277 chr6:121490843 G>A

Sequence
ttatgaattctttttctcctctgt[G/A]accatttgagctcactatccttgt
ASB in cell types
A549 (lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) -0.84 1.54 1.000.03 1.00
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  information processing speed (symbol search),  ldl cholesterol
GTEx eQTL Brain_Putamen_basal_ganglia,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

Download