rs1408944 chr10:79248726 A>G

Sequence
agcttgtccagacctccccacaac[A/G]gtcctctgctctcctggaaaagag
ASB in cell types
CD14+ monocytes breast tumor monocyte-derived macrophages from peripheral blood
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.18 -0.38 3.0·10-31.00 2.00 n/a No Hit
SPI1_HUMAN 1.96 0.14 0.031.00 1.96 n/a No Hit
ESR1_HUMAN 2.15 0.17 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Breast_Mammary_Tissue

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