rs1408954 chr1:59020518 A>G
- Sequence
gtccagggtaggagatacttctcc[A/G]ggctctcacttatgggggctttcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.30 | -4.25 | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 0.40 | 1.02 | 1.00 | n/a | n/a |
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