rs1410873 chr1:234612108 C>G
- Sequence
ctgtgacactcattccagtacatg[C/G]cttcacccactgcgtcactgccca
- ASB in cell types
- HepG2 (hepatoblastoma) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- TEAD3_HUMAN CDK8_HUMAN SP130_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD3_HUMAN | 2.16 | -1.89 | 1.00 | -1.71 | Weak Concordant | |||
| CDK8_HUMAN | 1.83 | -0.15 | 2.00 | n/a | n/a | |||
| SP130_HUMAN | 2.42 | -2.16 | 1.00 | n/a | n/a | |||
| ESR1_HUMAN | n/a | 2.48 | 2.00 | n/a | No Hit |
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Motif analysis
