rs1411662 chr9:82489457 A>G
- Sequence
tgacaaagatcccatgcttttccc[A/G]ctcagctcattgtatgcctcacac
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.59 | n/a | 1.67 | 0.43 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP fasting blood glucose, fasting insulin, homa-ir, systolic blood pressure (sbp), total cholesterol