rs1411823 chr10:19788512 G>A

Sequence
gtgtgtttgcactggattaaaaac[G/A]tggctctgtcattgatcagctgca
ASB in cell types
MS-1 (Small cell lung carcinoma) foreskin keratinocyte
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 2.43 0.28 0.010.76 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP autism with low iq,  body mass index (bmi),  paternal transmission distortion,  transmission distortion
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Whole_Blood

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