rs1414402 chr9:131046685 C>T

Sequence
tttgcccttaaccgctgtggtggc[C/T]tataccgtggtccctgactccagg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA5_HUMAN 2.06 n/a 0.021.00 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  hdl cholesterol,  rheumatoid arthritis,  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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