rs1415954 chr10:118608099 C>T

Sequence
tgcacttggctcatactactggct[C/T]agatcccacagtgagccaggtgcc
ASB in cell types
TMD8 (diffuse large B-cell lymphoma)
ASB for transcription factors
ITF2_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ITF2_HUMAN -0.16 3.24 0.834.2·10-4 1.75 n/a No Hit
ESR1_HUMAN 0.35 1.79 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  refractive error,  rheumatoid arthritis
GTEx eQTL Heart_Atrial_Appendage

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