rs1417570 chr10:30818188 G>C
- Sequence
ctgtcgacaggaggaagtgggctg[G/C]ggcttggcttctaaggctgtaggg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- COT1_HUMAN NCOR1_HUMAN ETV1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 2.94 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -4.63 | 1.72 | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | n/a | 3.04 | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | -1.45 | 2.36 | 2.00 | n/a | n/a | |||
| NFIA_HUMAN | -5.04 | 2.96 | 2.00 | n/a | No Hit |
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