rs1418757 chr10:28242124 C>A

Sequence
tatatatcaacaagaaaccaagta[C/A]ttttcaaatacatttcctctaaat
ASB in cell types
foreskin keratinocyte GM19193 (female B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.78 0.57 0.031.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin,  homa-b,  homa-ir,  ldl cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cortex,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Liver,  Nerve_Tibial,  Pancreas,  Prostate,  Stomach,  Thyroid,  Whole_Blood

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