rs1419408 chr7:127471032 C>T

Sequence
cagtttccctctctgctcttcttc[C/T]tctggtttcccttctgaactcctc
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.43 1.69 1.000.04 1.00 1.69 Weak Concordant
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP adiponectin levels,  advanced age-related macular degeneration (geographic atrophy),  hdl cholesterol,  maternal transmission distortion,  parkinsons disease,  transmission distortion
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Pituitary,  Spleen,  Testis

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