rs1421195 chr18:45441272 G>C
- Sequence
gctaagaaatggctctttcaagca[G/C]agattccaaggataagtctacatg
- ASB in cell types
- foreskin keratinocyte MCF10CA1a (breast metastatic epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.74 | 0.85 | 1.29 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, chronic kidney disease, cystatin c in serum, systolic blood pressure (sbp), total cholesterol