rs1422447 chr5:128771097 C>T

Sequence
agtcccatactttcccctaaagat[C/T]ggccttagacaaatgtttttcaca
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) monocyte-derived dendritic cells

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
CTV-1 (Adult T acute lymphoblastic leukemia) 1.21 0.47 0.010.44 1.00
monocyte-derived dendritic cells 2.28 -1.54 0.041.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP eye color,  sporadic creutzfeldt-jakob disease
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Cortex,  Brain_Hypothalamus,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Esophagus_Mucosa,  Nerve_Tibial,  Testis,  Whole_Blood

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