rs1422547 chr5:163916511 C>G
- Sequence
cagagggagaacctgatttgccta[C/G]actgggtcattttgagacaggcag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
- ASB for transcription factors
- SKI_HUMAN STAT1_HUMAN CBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKI_HUMAN | -0.68 | 2.17 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | -1.53 | 2.40 | 1.67 | n/a | No Hit | |||
| CBP_HUMAN | 2.44 | 0.57 | 2.00 | n/a | n/a |
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