rs1422877 chr5:159412504 A>G
- Sequence
ttttggaaacagtggttgcgacac[A/G]gaggaaactccccctcccagccct
- ASB in cell types
- MDM(monocyte derived macrophages) SUM159PT (Triple negative breast cancer) MV-4-11 (Childhood acute monocytic leukemia) macrophages
- ASB for transcription factors
- CEBPB_HUMAN CDK9_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.52 | -0.14 | 1.50 | -0.46 | Weak Concordant | |||
| CDK9_HUMAN | 1.22 | 0.17 | 1.00 | n/a | n/a |
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Motif analysis
