rs1423131 chr5:62144623 A>G
- Sequence
aacaatgagcaacccagtgactac[A/G]aaagaaaaaggaaataggcatgca
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.52 | -1.22 | 2.00 | -0.27 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), alzheimers disease, hdl cholesterol, microalbuminuria, sporadic creutzfeldt-jakob disease, total cholesterol, triglycerides, urinary albumin-to-creatinine ratio